Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863995.1_cds_XP_016515851.1_28153
CDS Infomation

[gene=LOC107832508] [db_xref=GeneID:107832508] [protein=leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016515851.1] [location=join(614..990,2701..2845,2917..2973,3717..3836,3930..4034,4176..4399,4490..4556,4639..4793,4952..5216,5375..5569,5717..5796,6698..6760,6900..6981,7420..7497,7566..7667,7784..7956,8153..8273,8396..8473,9110..9241,9671..9913)] [gbkey=CDS]
Sequence

ATGCTCCAAACTTCCACGCACCACCACTTTCCTCCTCAGCTCCTCCCTCGTCATCCTCTA
TGCCTCCGTATATCACTTATAATCTCCGCCCACCGCCGCCCTTTACTCCGCCACCAATCT
TATACCCATATACGCCTCCGAGTCTCCAGCTGTACAAAGAGTTCTAGCAAAAATACAGTG
GCTGAGCTAGTAAAAGCAGTTGATGGTCAAAAAGCTAATGACCAACAGCAACAGCAGGTT
AAAAGGCCTTACCCATTTCACGAAATTGAACCAAAATGGCAACACTATTGGGAAGAGAAT
AAGACATTTCGAACCCCTGATGAGATTGATACTTCAAAGCCCAAATTCTATGTTCTTGAT
ATGTTTCCTTATCCAAGTGGAGCTGGTTTGCATGTTGGACATCCACTTGGATATACTGCA
ACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGA
TGGGATGCATTTGGTTTACCTGCTGAACAATACGCTATTGAGACAGGCACACATCCAAAA
ATCACAACTTTGAGGAATATTAGTCGTTTCCGCTCGCAGCTTAAATCTCTAGGCTTCTCT
TATGATTGGGATCGTGAAATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGG
ATATTTCTTCAACTTATGAAGAGAGGACTAGCTTATCAGGCTGAAGTGCCTGTCAATTGG
TGTCCGGCACTTGGCACTGTCTTGGCAAATGAAGAAGTGGTTGATGGTGTAAGTGAAAGA
GGGGGGCATCCAGTCATCAGAAAGCCTATGCGGCAGTGGATGTTGAGGATTACTGCTTAT
GCTGACCGTCTTCTTGAGGATTTGGATGATCTAGACTGGCCTGAAAGTATAAAGGAAATG
CAGAGGAATTGGATTGGGAGATCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGT
AACGGTCAGGAAGAAGAGAAAAGGATAACAGTTTATACAACAAGGCCGGACACTATTTTT
GGTGCAACATATTTAGTCCTTGCACCTGAGCATCCGATTCTGTCATCAGTTTTATCTGAA
GCACAGAGTAAACATGTAGAGGAATACAGAGAACTTGCCATTAGAAAGAGTGACCTTGAG
AGGACTGAGCTTCAAAAGGAAAAAACAGGTGTCTTTACCGGGTGTTATGCAAGAAATCCA
GCCAATGGACAAGCTATTCCTATTTGGGTTGCTGATTATGTCTTGGGAAGCTACGGCACA
GGAGCAATAATGGCCGTGCCTGCCCATGACACACGCGACTATGAATTTGCTGTGAAGTAC
AGTATCCCAATTTCTTGGGTTGTAAAACCAGATGATGGCGATGGTGGCAATTTTGAGAGA
CCATATTCAGGTGAAGGAACTATGATAAATGCATCAAGTTCAGAGTCAGGGCTTGACATT
AATGGTTTGCCTAGCAAGGACGCTGCTTCAAGAGTCATTCAATGGCTTGAGAAAAGTGGA
AACGGGAAGCAAAAGGTAAATTACAAGTTAAGGGACTGGCTTTTTGCTCGGCAACGCTAT
TGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTTCA
GAAACTGAGCTGCCCCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACAGGGACAGGG
GAGCCACCTCTTTCCAAAGCAGATTCTTGGGTTATAACCAAAGATCCTTTATCTGGAAAA
GCTGCTAGACGAGAAACAAATACCATGCCCCAGTGGGCTGGTTCTTGCTGGTACTATCTA
AGATTTATGGACCCAAAGAACTCCAGTGCATTGGTTGACAAGGCAAAAGAACAGTACTGG
AGCCCAGTTGATGTGTATGTTGGTGGTGCTGAGCATGCTGTTCTTCATTTACTTTATGCC
AGGTTCTGGCACAAGGTTCTCTATGACATAGGTGTTGTGTCAACAAAGGAACCATTTAAG
TGTGTCATAAATCAAGGCATCATCCTTGGTGAAGTTCAATATACAGCATGCAAAGATGAC
AAAGGAAACTTGATATCAGCAGACTCTGTCGCTGAGCTGGCTGAGTACAACCAAGAGAAA
ATACCTGAGGAAAAGGTCATGAAATCTGGCGACTTCTTTGTATTGAAAGATAACCCCAAT
GTTCGCTTGATTGCCCGAGCTCACAAGATGAGTAAAAGTAGGGGAAATGTCATCAATCCT
GATGATGTTGTTTTGGAGTATGGTGCAGATTCTCTGCGCTTATATGAAATGTTTATGGGT
CCATTAAGATCTTGGAGATTGATTGTTGGTTCACCCTCGCCCGCTGGTTCATATCCGGAT
GGAACTTCCACAGTTGATGAGAAACCTTCAATTGAACAACTTCGTTCTTTACACAGATGC
ATTGATAAGGTAACTGAAGAAATTGAAGGAACTCGGTTCAACACTGGAATTTCTGCAATG
ATGGAGTTTATTAACGCAGCATATAAGTGGGACAAACTTCCGAGATCAATTATTGAAGCA
TTTGTTTTGCTGCTCTCACCGTATGCACCTCACATGGCGGAGGAGCTCTGGTCTCGTCTG
GGACACTCAAATTCCTTGGCATATGAGCCCTTCCCTAAGGCTGATGCTGCCTATTTAAAA
GAGAGCACTGTAGTCCTTCCAGTCCAAATAAATGGAAAGACTAGAGGTACCATACAGGTC
GAAGAAACATGCACAGAAGAGGAGGCCTTTAGATTAGCTTCACTTGATACAAAACTATCC
AAATTTTTGGATGGAAAATCTATTAGGAAGAGAATTTACGTCCAAGGAAAAATTCTGAAC
ATCGTGATAGATGCACAGAAAAAGGTTAAGGTAGCTCAATAG

Peptide Sequence

PEP ID

XP_016515851.1
PEP Infomation

PREDICTED: leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MLQTSTHHHFPPQLLPRHPLCLRISLIISAHRRPLLRHQSYTHIRLRVSSCTKSSSKNTV
AELVKAVDGQKANDQQQQQVKRPYPFHEIEPKWQHYWEENKTFRTPDEIDTSKPKFYVLD
MFPYPSGAGLHVGHPLGYTATDILARFKRMQGFNVLHPMGWDAFGLPAEQYAIETGTHPK
ITTLRNISRFRSQLKSLGFSYDWDREISTTEPDYYKWTQWIFLQLMKRGLAYQAEVPVNW
CPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESIKEM
QRNWIGRSEGAELDFVVINGNGQEEEKRITVYTTRPDTIFGATYLVLAPEHPILSSVLSE
AQSKHVEEYRELAIRKSDLERTELQKEKTGVFTGCYARNPANGQAIPIWVADYVLGSYGT
GAIMAVPAHDTRDYEFAVKYSIPISWVVKPDDGDGGNFERPYSGEGTMINASSSESGLDI
NGLPSKDAASRVIQWLEKSGNGKQKVNYKLRDWLFARQRYWGEPIPVIFLDDTGEGIPVS
ETELPLTLPELDDFTPTGTGEPPLSKADSWVITKDPLSGKAARRETNTMPQWAGSCWYYL
RFMDPKNSSALVDKAKEQYWSPVDVYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFK
CVINQGIILGEVQYTACKDDKGNLISADSVAELAEYNQEKIPEEKVMKSGDFFVLKDNPN
VRLIARAHKMSKSRGNVINPDDVVLEYGADSLRLYEMFMGPLRSWRLIVGSPSPAGSYPD
GTSTVDEKPSIEQLRSLHRCIDKVTEEIEGTRFNTGISAMMEFINAAYKWDKLPRSIIEA
FVLLLSPYAPHMAEELWSRLGHSNSLAYEPFPKADAAYLKESTVVLPVQINGKTRGTIQV
EETCTEEEAFRLASLDTKLSKFLDGKSIRKRIYVQGKILNIVIDAQKKVKVAQ

Transcript Sequence

Gene sequence data has not been registered.